Vibrio campbellii strain VIB391

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii strain VIB391 is a gram-negative bacterium predominantly found in marine habitats, specifically within the Changjiang estuary and other coastal sites. This strain thrives optimally at a temperature of 35°C, indicating its adaptation to warm marine environments. VIB391 is characterized by having a single replicon, which contributes to its genetic stability and adaptability within its ecological niche. The bacterium has been identified to interact with various hosts, including members of the phylum Mollusca and the brine shrimp species Artemia sp. These interactions suggest that V. campbellii may play significant roles in marine ecosystems, particularly in nutrient cycling and microbial dynamics. The accession number for this strain is MNLF00000000.1, which provides a reference point for further genetic and ecological studies. Understanding the specific ecological roles of V. campbellii strain VIB391 can shed light on its contributions to marine microbiomes, including its potential effects on host organisms and the overall health of coastal ecosystems. The presence of this bacterium in estuarine environments highlights the importance of microbial diversity in supporting marine life and maintaining ecological balance in coastal waters.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
Strainstrain VIB391

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii strain VIB391
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain VIB391 contig82, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5087 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ggdef domain-containing proteinBK412_20795Not AvailablePositive4653626 - 465519160110.5
log family proteinBK412_20800Not AvailablePositive4655410 - 465678651009.5
flap endonuclease xniBK412_20805Not AvailablePositive4656845 - 465762729223.8
dna/rna endonuclease gBK412_20810Not AvailablePositive4657820 - 465857228104.8
23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmmBK412_20815Not AvailableNegative4658660 - 465975141679.7
hypothetical proteinBK412_20820Not AvailableNegative4659748 - 466014614439.3
alpha/beta hydrolaseBK412_20825Not AvailableNegative4660136 - 466075922823.4
transcriptional regulator gcvaBK412_20830Not AvailableNegative4660740 - 466166034458.2
trna 4-thiouridine(8) synthase thiiBK412_20835Not AvailableNegative4662196 - 466364454508.6
flagellar motor protein motbBK412_20840Not AvailableNegative4663843 - 466478735287.0

Displaying genes 4111 – 4120 of 5161 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.