Vibrio campbellii strain LMB29

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii strain LMB29 is a Gram-negative bacterium primarily found in marine environments, specifically within the Changjiang estuary and other coastal sites. This strain thrives optimally at a temperature of 35°C, which is indicative of its adaptation to warmer marine habitats. Genetically, strain LMB29 possesses five replicons, suggesting a complex genomic architecture that may contribute to its adaptability and survival in changing environments. This bacterium interacts with various hosts, notably members of the phylum Mollusca and Artemia species, indicating its role in the marine food web and potential implications for aquaculture. The accessions associated with Vibrio campbellii strain LMB29 include NZ_CP019296.1, NZ_CP019293.1, NZ_CP019297.1, NZ_CP019298.1, and NZ_CP019294.1, which provide genomic resources for further research into its characteristics and behaviors. Ecologically, the presence of Vibrio campbellii strain LMB29 in coastal and estuarine habitats highlights its potential significance in marine ecosystems, particularly in interactions with molluscan hosts. Understanding its role could provide insights into microbial dynamics in these environments, as well as potential impacts on aquaculture practices where mollusks are cultivated.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
Strainstrain LMB29

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii strain LMB29
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain LMB29 plasmid pLMB143, complete sequence.

Gene Summary

Adenine Count

42335 bp

Thymine Count

40244 bp

Guanine Count

29516 bp

Cytosine Count

31019 bp

Genome Length

143114 bp

Protein-coding Genes

130 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tssgBWP24_RS20265Not AvailablePositive867830 - 86882838127.1
lrp/asnc family transcriptional regulatorBWP24_RS20270Not AvailableNegative868928 - 86938016526.1
type vi secretion system membrane subunit tssmBWP24_RS20275Not AvailableNegative869413 - 872802128184.0
type vi secretion system impa family n-terminal domain-containing proteinBWP24_RS20280Not AvailableNegative872830 - 87413449614.0
hypothetical proteinBWP24_RS20285Not AvailablePositive874758 - 87535722047.0
type vi secretion system-associated fha domain proteinBWP24_RS20290Not AvailablePositive875367 - 87688155535.9
type vi secretion system lipoprotein tssjBWP24_RS20295Not AvailablePositive876874 - 87737418727.3
type vi secretion system baseplate subunit tsskBWP24_RS20300Not AvailablePositive877386 - 87871149164.2
type ivb secretion system protein icmh/dotuBWP24_RS20305Not AvailablePositive878708 - 87949930319.9
paar-like domain-containing proteinBWP24_RS20310Not AvailablePositive879649 - 88117253594.6

Displaying genes 4321 – 4330 of 5509 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.