Vibrio campbellii strain LMB29

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii strain LMB29 is a Gram-negative bacterium primarily found in marine environments, specifically within the Changjiang estuary and other coastal sites. This strain thrives optimally at a temperature of 35°C, which is indicative of its adaptation to warmer marine habitats. Genetically, strain LMB29 possesses five replicons, suggesting a complex genomic architecture that may contribute to its adaptability and survival in changing environments. This bacterium interacts with various hosts, notably members of the phylum Mollusca and Artemia species, indicating its role in the marine food web and potential implications for aquaculture. The accessions associated with Vibrio campbellii strain LMB29 include NZ_CP019296.1, NZ_CP019293.1, NZ_CP019297.1, NZ_CP019298.1, and NZ_CP019294.1, which provide genomic resources for further research into its characteristics and behaviors. Ecologically, the presence of Vibrio campbellii strain LMB29 in coastal and estuarine habitats highlights its potential significance in marine ecosystems, particularly in interactions with molluscan hosts. Understanding its role could provide insights into microbial dynamics in these environments, as well as potential impacts on aquaculture practices where mollusks are cultivated.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
Strainstrain LMB29

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii strain LMB29
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain LMB29 plasmid pLMB143, complete sequence.

Gene Summary

Adenine Count

42335 bp

Thymine Count

40244 bp

Guanine Count

29516 bp

Cytosine Count

31019 bp

Genome Length

143114 bp

Protein-coding Genes

130 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseBWP24_RS14540Not AvailableNegative3074655 - 307601948495.8
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseBWP24_RS14545Not AvailableNegative3076016 - 307749753090.3
penicillin-binding transpeptidase domain-containing proteinBWP24_RS14550Not AvailableNegative3077558 - 307936365435.0
cell division protein ftslBWP24_RS14555Not AvailableNegative3079360 - 307967711980.7
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhBWP24_RS14560Not AvailableNegative3079683 - 308063335107.1
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive3080810 - 3081238Not Available
16s rrna (cytidine(1402)-2'-o)-methyltransferaseBWP24_RS14570Not AvailableNegative3081758 - 308262131599.1
penicillin-binding protein activatorBWP24_RS14575Not AvailablePositive3082690 - 308450167662.4
yran family proteinBWP24_RS14580Not AvailablePositive3084488 - 308485614213.1
phosphoheptose isomeraseBWP24_RS14585Not AvailablePositive3084860 - 308545021057.1

Displaying genes 2931 – 2940 of 5509 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.