Vibrio campbellii strain LMB29

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii strain LMB29 is a Gram-negative bacterium primarily found in marine environments, specifically within the Changjiang estuary and other coastal sites. This strain thrives optimally at a temperature of 35°C, which is indicative of its adaptation to warmer marine habitats. Genetically, strain LMB29 possesses five replicons, suggesting a complex genomic architecture that may contribute to its adaptability and survival in changing environments. This bacterium interacts with various hosts, notably members of the phylum Mollusca and Artemia species, indicating its role in the marine food web and potential implications for aquaculture. The accessions associated with Vibrio campbellii strain LMB29 include NZ_CP019296.1, NZ_CP019293.1, NZ_CP019297.1, NZ_CP019298.1, and NZ_CP019294.1, which provide genomic resources for further research into its characteristics and behaviors. Ecologically, the presence of Vibrio campbellii strain LMB29 in coastal and estuarine habitats highlights its potential significance in marine ecosystems, particularly in interactions with molluscan hosts. Understanding its role could provide insights into microbial dynamics in these environments, as well as potential impacts on aquaculture practices where mollusks are cultivated.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
Strainstrain LMB29

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii strain LMB29
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain LMB29 plasmid pLMB143, complete sequence.

Gene Summary

Adenine Count

42335 bp

Thymine Count

40244 bp

Guanine Count

29516 bp

Cytosine Count

31019 bp

Genome Length

143114 bp

Protein-coding Genes

130 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cnnm domain-containing proteinBWP24_RS00675Not AvailableNegative133672 - 13480541995.6
nucleoid-associated protein hu-alphaBWP24_RS00680Not AvailablePositive135059 - 1353319465.34
duf1481 domain-containing proteinBWP24_RS00685Not AvailablePositive135371 - 13606926455.3
phosphoribosylamine--glycine ligaseBWP24_RS00690Not AvailableNegative136154 - 13744345754.4
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseBWP24_RS00695Not AvailableNegative137562 - 13917258150.0
hypothetical proteinBWP24_RS29875Not AvailablePositive139206 - 1393826553.06
zn(2+)-responsive transcriptional regulatorBWP24_RS00700Not AvailablePositive139440 - 13983814638.7
lysine decarboxylation/transport transcriptional activator cadcBWP24_RS00705Not AvailablePositive140004 - 14157559388.5
cadaverine/lysine antiporterBWP24_RS00720Not AvailablePositive142353 - 14369947069.8
lysine decarboxylase cadaBWP24_RS00725Not AvailablePositive143817 - 14595280103.9

Displaying genes 261 – 270 of 5509 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.