Vibrio campbellii strain LMB29

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii strain LMB29 is a Gram-negative bacterium primarily found in marine environments, specifically within the Changjiang estuary and other coastal sites. This strain thrives optimally at a temperature of 35°C, which is indicative of its adaptation to warmer marine habitats. Genetically, strain LMB29 possesses five replicons, suggesting a complex genomic architecture that may contribute to its adaptability and survival in changing environments. This bacterium interacts with various hosts, notably members of the phylum Mollusca and Artemia species, indicating its role in the marine food web and potential implications for aquaculture. The accessions associated with Vibrio campbellii strain LMB29 include NZ_CP019296.1, NZ_CP019293.1, NZ_CP019297.1, NZ_CP019298.1, and NZ_CP019294.1, which provide genomic resources for further research into its characteristics and behaviors. Ecologically, the presence of Vibrio campbellii strain LMB29 in coastal and estuarine habitats highlights its potential significance in marine ecosystems, particularly in interactions with molluscan hosts. Understanding its role could provide insights into microbial dynamics in these environments, as well as potential impacts on aquaculture practices where mollusks are cultivated.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
Strainstrain LMB29

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii strain LMB29
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain LMB29 plasmid pLMB143, complete sequence.

Gene Summary

Adenine Count

42335 bp

Thymine Count

40244 bp

Guanine Count

29516 bp

Cytosine Count

31019 bp

Genome Length

143114 bp

Protein-coding Genes

130 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate decarboxylaseBWP24_RS00255Not AvailablePositive55027 - 5628045799.5
diaminopimelate epimeraseBWP24_RS00260Not AvailablePositive56291 - 5712130427.4
duf484 family proteinBWP24_RS00265Not AvailablePositive57115 - 5784627517.8
tyrosine recombinase xercBWP24_RS00270Not AvailablePositive57812 - 5875335454.6
5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigbBWP24_RS00275Not AvailablePositive58767 - 5948326908.4
eal domain-containing proteinBWP24_RS00280Not AvailablePositive59623 - 6210993980.0
pp_00048BWP24_RS00285Not AvailableNegative62218 - 62814Not Available
cog3650 family proteinBWP24_RS00290Not AvailableNegative62814 - 6436457356.4
eve domain-containing proteinBWP24_RS00295Not AvailablePositive64406 - 6487618274.1
cof-type had-iib family hydrolaseBWP24_RS00300Not AvailableNegative64947 - 6577130549.0

Displaying genes 181 – 190 of 5509 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.