Vibrio campbellii strain LMB29

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii strain LMB29 is a Gram-negative bacterium primarily found in marine environments, specifically within the Changjiang estuary and other coastal sites. This strain thrives optimally at a temperature of 35°C, which is indicative of its adaptation to warmer marine habitats. Genetically, strain LMB29 possesses five replicons, suggesting a complex genomic architecture that may contribute to its adaptability and survival in changing environments. This bacterium interacts with various hosts, notably members of the phylum Mollusca and Artemia species, indicating its role in the marine food web and potential implications for aquaculture. The accessions associated with Vibrio campbellii strain LMB29 include NZ_CP019296.1, NZ_CP019293.1, NZ_CP019297.1, NZ_CP019298.1, and NZ_CP019294.1, which provide genomic resources for further research into its characteristics and behaviors. Ecologically, the presence of Vibrio campbellii strain LMB29 in coastal and estuarine habitats highlights its potential significance in marine ecosystems, particularly in interactions with molluscan hosts. Understanding its role could provide insights into microbial dynamics in these environments, as well as potential impacts on aquaculture practices where mollusks are cultivated.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
Strainstrain LMB29

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii strain LMB29
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain LMB29 plasmid pLMB143, complete sequence.

Gene Summary

Adenine Count

42335 bp

Thymine Count

40244 bp

Guanine Count

29516 bp

Cytosine Count

31019 bp

Genome Length

143114 bp

Protein-coding Genes

130 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cbb3-type cytochrome oxidase subunit 3BWP24_RS08725Not AvailablePositive1777654 - 17778276552.79
cytochrome-c oxidase, cbb3-type subunit iiiBWP24_RS08730Not AvailablePositive1777827 - 177880135493.0
fixh family proteinBWP24_RS08735Not AvailablePositive1778891 - 177936718024.8
heavy metal translocating p-type atpaseBWP24_RS08740Not AvailablePositive1779372 - 178173585796.7
cbb3-type cytochrome oxidase assembly protein ccosBWP24_RS08745Not AvailablePositive1781750 - 17819146239.6
sulfite exporter taue/safe family proteinBWP24_RS08750Not AvailablePositive1781924 - 178260123926.0
fnr family transcription factorBWP24_RS08755Not AvailablePositive1782692 - 178343827817.7
universal stress protein uspeBWP24_RS08760Not AvailablePositive1783620 - 178456735363.4
trna 2-thiocytidine(32) synthetase ttcaBWP24_RS08765Not AvailableNegative1784694 - 178558733967.9
duf2987 domain-containing proteinBWP24_RS08770Not AvailableNegative1785786 - 178644824509.6

Displaying genes 1781 – 1790 of 5509 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.