Vibrio campbellii strain BoB-90

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii strain BoB-90 is a Gram-negative bacterium primarily found in marine habitats, specifically within the Changjiang estuary and other coastal sites. This organism thrives optimally at a temperature of 35°C, reflecting its adaptation to warm aquatic environments. Genetically, strain BoB-90 is characterized by the presence of five replicons, which may contribute to its genetic diversity and adaptability in various marine ecosystems. This strain is associated with hosts including mollusks and Artemia sp., indicating its role in the marine food web and potential interactions with these organisms. The presence of multiple accessions (NZ_CP026319.1, NZ_CP026317.1, NZ_CP026315.1, NZ_CP026318.1, NZ_CP026320.1) suggests that strain BoB-90 has been subjected to extensive genetic characterization, which can provide insights into its physiological traits and ecological roles. In summary, Vibrio campbellii strain BoB-90 is a marine bacterium that inhabits estuarine and coastal environments, associated with key aquatic hosts. Its optimal growth temperature and genetic composition underscore its adaptation to specific ecological niches, highlighting its importance in marine microbiomes and potential roles in nutrient cycling and host interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
Strainstrain BoB-90

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii strain BoB-90
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain BoB-90 plasmid unnamed 3, complete

Gene Summary

Adenine Count

18550 bp

Thymine Count

19906 bp

Guanine Count

15746 bp

Cytosine Count

14846 bp

Genome Length

69048 bp

Protein-coding Genes

77 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginyltransferaseC1N51_RS01325Not AvailablePositive287665 - 28836627535.6
translation initiation factor if-1C1N51_RS01330Not AvailablePositive288447 - 2886658223.14
atp-dependent clp protease atp-binding subunit clpaC1N51_RS01335Not AvailableNegative288852 - 29112283469.9
atp-dependent clp protease adapter clpsC1N51_RS01340Not AvailableNegative291171 - 29149112292.6
cold shock domain-containing protein cspdC1N51_RS01345Not AvailablePositive292202 - 2924207845.15
nadp-dependent isocitrate dehydrogenaseC1N51_RS01350Not AvailableNegative292567 - 29479280062.2
pseudouridine synthaseC1N51_RS01355Not AvailablePositive295164 - 29586826479.8
duf2057 family proteinC1N51_RS01360Not AvailableNegative295939 - 29661624917.6
porinC1N51_RS01365Not AvailableNegative296693 - 29771837338.0
atp-dependent dna helicase dingC1N51_RS01370Not AvailablePositive298235 - 30031077906.2

Displaying genes 571 – 580 of 3765 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.