Vibrio campbellii strain BoB-90

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii strain BoB-90 is a Gram-negative bacterium primarily found in marine habitats, specifically within the Changjiang estuary and other coastal sites. This organism thrives optimally at a temperature of 35°C, reflecting its adaptation to warm aquatic environments. Genetically, strain BoB-90 is characterized by the presence of five replicons, which may contribute to its genetic diversity and adaptability in various marine ecosystems. This strain is associated with hosts including mollusks and Artemia sp., indicating its role in the marine food web and potential interactions with these organisms. The presence of multiple accessions (NZ_CP026319.1, NZ_CP026317.1, NZ_CP026315.1, NZ_CP026318.1, NZ_CP026320.1) suggests that strain BoB-90 has been subjected to extensive genetic characterization, which can provide insights into its physiological traits and ecological roles. In summary, Vibrio campbellii strain BoB-90 is a marine bacterium that inhabits estuarine and coastal environments, associated with key aquatic hosts. Its optimal growth temperature and genetic composition underscore its adaptation to specific ecological niches, highlighting its importance in marine microbiomes and potential roles in nutrient cycling and host interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
Strainstrain BoB-90

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii strain BoB-90
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain BoB-90 plasmid unnamed 3, complete

Gene Summary

Adenine Count

18550 bp

Thymine Count

19906 bp

Guanine Count

15746 bp

Cytosine Count

14846 bp

Genome Length

69048 bp

Protein-coding Genes

77 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system inner rod subunit sctiC1N51_RS00870Not AvailableNegative193365 - 19370912647.0
yopr family t3ss polymerization control proteinC1N51_RS00875Not AvailableNegative193718 - 19438024445.6
yscg family type iii secretion system chaperoneC1N51_RS00880Not AvailableNegative194380 - 19473612819.4
type iii secretion system needle filament subunit sctfC1N51_RS00885Not AvailableNegative194740 - 1949889172.76
esce/ysce/ssae family type iii secretion system needle protein co-chaperoneC1N51_RS00890Not AvailableNegative195005 - 1952117670.2
type iii secretion system inner membrane ring subunit sctdC1N51_RS00895Not AvailableNegative195198 - 19649947944.3
type iii secretion system outer membrane ring subunit sctcC1N51_RS00900Not AvailableNegative196505 - 19837668786.9
yscb family type iii secretion system chaperoneC1N51_RS00905Not AvailableNegative198376 - 19880416172.3
t3ss regulon anti-activator exsd domain-containing proteinC1N51_RS00910Not AvailableNegative198817 - 19979738017.0
arac family transcriptional regulatorC1N51_RS00915Not AvailableNegative199941 - 20080132938.3

Displaying genes 481 – 490 of 3765 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.