Vibrio campbellii strain BoB-90

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii strain BoB-90 is a Gram-negative bacterium primarily found in marine habitats, specifically within the Changjiang estuary and other coastal sites. This organism thrives optimally at a temperature of 35°C, reflecting its adaptation to warm aquatic environments. Genetically, strain BoB-90 is characterized by the presence of five replicons, which may contribute to its genetic diversity and adaptability in various marine ecosystems. This strain is associated with hosts including mollusks and Artemia sp., indicating its role in the marine food web and potential interactions with these organisms. The presence of multiple accessions (NZ_CP026319.1, NZ_CP026317.1, NZ_CP026315.1, NZ_CP026318.1, NZ_CP026320.1) suggests that strain BoB-90 has been subjected to extensive genetic characterization, which can provide insights into its physiological traits and ecological roles. In summary, Vibrio campbellii strain BoB-90 is a marine bacterium that inhabits estuarine and coastal environments, associated with key aquatic hosts. Its optimal growth temperature and genetic composition underscore its adaptation to specific ecological niches, highlighting its importance in marine microbiomes and potential roles in nutrient cycling and host interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
Strainstrain BoB-90

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii strain BoB-90
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain BoB-90 plasmid unnamed 3, complete

Gene Summary

Adenine Count

18550 bp

Thymine Count

19906 bp

Guanine Count

15746 bp

Cytosine Count

14846 bp

Genome Length

69048 bp

Protein-coding Genes

77 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion chaperone sycnC1N51_RS00770Not AvailableNegative174817 - 17519113828.5
tyea family type iii secretion system gatekeeper subunitC1N51_RS00775Not AvailableNegative175178 - 17546211090.1
type iii secretion system gatekeeper subunit sctwC1N51_RS00780Not AvailableNegative175443 - 17633633105.0
sctn family type iii secretion system atpase vscnC1N51_RS00785Not AvailablePositive176523 - 17784547976.9
type iii secretion system stalk subunit sctoC1N51_RS00790Not AvailablePositive177842 - 17830318431.8
type iii secretion system needle length determinantC1N51_RS00795Not AvailablePositive178313 - 17968350453.9
type iii secretion system cytoplasmic ring protein sctqC1N51_RS00800Not AvailablePositive179683 - 18064836044.0
sctr family type iii secretion system export apparatus subunit vscrC1N51_RS00805Not AvailablePositive180645 - 18129524250.4
scts family type iii secretion system export apparatus subunit vscsC1N51_RS00810Not AvailablePositive181309 - 1815759594.13
type iii secretion system export apparatus subunit scttC1N51_RS00815Not AvailablePositive181572 - 18235428991.2

Displaying genes 461 – 470 of 3765 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.