Vibrio campbellii strain BoB-90

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii strain BoB-90 is a Gram-negative bacterium primarily found in marine habitats, specifically within the Changjiang estuary and other coastal sites. This organism thrives optimally at a temperature of 35°C, reflecting its adaptation to warm aquatic environments. Genetically, strain BoB-90 is characterized by the presence of five replicons, which may contribute to its genetic diversity and adaptability in various marine ecosystems. This strain is associated with hosts including mollusks and Artemia sp., indicating its role in the marine food web and potential interactions with these organisms. The presence of multiple accessions (NZ_CP026319.1, NZ_CP026317.1, NZ_CP026315.1, NZ_CP026318.1, NZ_CP026320.1) suggests that strain BoB-90 has been subjected to extensive genetic characterization, which can provide insights into its physiological traits and ecological roles. In summary, Vibrio campbellii strain BoB-90 is a marine bacterium that inhabits estuarine and coastal environments, associated with key aquatic hosts. Its optimal growth temperature and genetic composition underscore its adaptation to specific ecological niches, highlighting its importance in marine microbiomes and potential roles in nutrient cycling and host interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
Strainstrain BoB-90

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii strain BoB-90
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain BoB-90 plasmid unnamed 3, complete

Gene Summary

Adenine Count

18550 bp

Thymine Count

19906 bp

Guanine Count

15746 bp

Cytosine Count

14846 bp

Genome Length

69048 bp

Protein-coding Genes

77 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system minor pseudopilin gspiC1N51_RS05960Not AvailableNegative1258734 - 125912914377.5
prepilin-type n-terminal cleavage/methylation domain-containing proteinC1N51_RS05965Not AvailableNegative1259110 - 125971522449.6
type ii secretion system major pseudopilin gspgC1N51_RS05970Not AvailableNegative1259747 - 126019016165.1
type ii secretion system inner membrane protein gspfC1N51_RS05975Not AvailableNegative1260251 - 126147144730.5
type ii secretion system atpase gspeC1N51_RS05980Not AvailableNegative1261471 - 126297355827.4
type ii secretion system secretin gspdC1N51_RS05985Not AvailableNegative1262966 - 126499673679.1
type ii secretion system protein gspcC1N51_RS05990Not AvailableNegative1265033 - 126595633255.9
ribosome-associated heat shock protein hsp15C1N51_RS05995Not AvailablePositive1266212 - 126659815003.9
hsp33 family molecular chaperone hsloC1N51_RS06000Not AvailablePositive1266630 - 126750532330.2
phosphoenolpyruvate carboxykinase (atp)C1N51_RS06005Not AvailablePositive1267843 - 126947160101.0

Displaying genes 1471 – 1480 of 3765 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.