Lactococcus raffinolactis strain FAM 23217

Gram-positiveCocciFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Pseudolactococcus

Description

Lactococcus raffinolactis strain FAM 23217 is a Gram-positive, facultative anaerobic bacterium characterized by its cocci shape. This strain is notably found in a variety of fermented environments, including fermented cabbage, kimchi, fish, meat, milk, vegetables, and other fermented foods. The versatility in its habitat suggests a robust ability to thrive in diverse fermentation processes, which is essential for food preservation and flavor enhancement. With a single replicon, Lactococcus raffinolactis strain FAM 23217 reflects a streamlined genomic organization, potentially contributing to its adaptability in various ecological niches. The presence of flagella indicates motility, which may aid in colonization or movement within its environments, although the ecological implications of this feature in non-aquatic habitats are unclear. This strain is also associated with the host Gambeya albida, suggesting specific ecological interactions that could influence fermentation dynamics in its native habitats. The ability to ferment a wide range of substrates underscores its potential utility in food production and biotechnological applications, particularly in the fermentation of plant-based and animal-based products. Overall, Lactococcus raffinolactis strain FAM 23217 exemplifies the diversity of lactic acid bacteria in fermented ecosystems, highlighting its role in food preservation and flavor development, as well as its interactions with specific hosts and environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusPseudolactococcus
SpeciesPseudolactococcus raffinolactis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Lactococcus raffinolactis strain FAM 23217
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables
Biotic relationshipNot Available
Host(s)Gambeya albida
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactococcus raffinolactis strain FAM 23217 FAM23217_scf0074, whole

Gene Summary

Adenine Count

717722 bp

Thymine Count

699365 bp

Guanine Count

479398 bp

Cytosine Count

450611 bp

Genome Length

2347098 bp

Protein-coding Genes

2153 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii-a crispr-associated protein csm2FEZ46_11295Not AvailablePositive2243211 - 224363315978.2
type iii-a crispr-associated ramp protein csm3FEZ46_11300Not AvailablePositive2243633 - 224427723856.6
type iii-a crispr-associated ramp protein csm4FEZ46_11305Not AvailablePositive2244279 - 224517233962.3
type iii-a crispr-associated ramp protein csm5FEZ46_11310Not AvailablePositive2245169 - 224623040544.9
type iii-a crispr-associated protein csm6FEZ46_11315Not AvailablePositive2246227 - 224745947164.5
crispr system precrrna processing endoribonuclease ramp protein cas6FEZ46_11320Not AvailablePositive2247456 - 224820228737.6
recombinase family proteinFEZ46_11330Not AvailablePositive2250317 - 225086820652.7
is6 family transposaseFEZ46_11345Not AvailablePositive2251541 - 22516624868.88
transposaseFEZ46_11350Not AvailableNegative2251663 - 225197612378.1
gnat family n-acetyltransferaseFEZ46_11355Not AvailableNegative2252031 - 225252818479.0

Displaying genes 2201 – 2210 of 2318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.