Lactococcus raffinolactis strain FAM 23217

Gram-positiveCocciFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Pseudolactococcus

Description

Lactococcus raffinolactis strain FAM 23217 is a Gram-positive, facultative anaerobic bacterium characterized by its cocci shape. This strain is notably found in a variety of fermented environments, including fermented cabbage, kimchi, fish, meat, milk, vegetables, and other fermented foods. The versatility in its habitat suggests a robust ability to thrive in diverse fermentation processes, which is essential for food preservation and flavor enhancement. With a single replicon, Lactococcus raffinolactis strain FAM 23217 reflects a streamlined genomic organization, potentially contributing to its adaptability in various ecological niches. The presence of flagella indicates motility, which may aid in colonization or movement within its environments, although the ecological implications of this feature in non-aquatic habitats are unclear. This strain is also associated with the host Gambeya albida, suggesting specific ecological interactions that could influence fermentation dynamics in its native habitats. The ability to ferment a wide range of substrates underscores its potential utility in food production and biotechnological applications, particularly in the fermentation of plant-based and animal-based products. Overall, Lactococcus raffinolactis strain FAM 23217 exemplifies the diversity of lactic acid bacteria in fermented ecosystems, highlighting its role in food preservation and flavor development, as well as its interactions with specific hosts and environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusPseudolactococcus
SpeciesPseudolactococcus raffinolactis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Lactococcus raffinolactis strain FAM 23217
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables
Biotic relationshipNot Available
Host(s)Gambeya albida
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactococcus raffinolactis strain FAM 23217 FAM23217_scf0074, whole

Gene Summary

Adenine Count

717722 bp

Thymine Count

699365 bp

Guanine Count

479398 bp

Cytosine Count

450611 bp

Genome Length

2347098 bp

Protein-coding Genes

2153 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorFEZ46_10590Not AvailablePositive2110227 - 211112934340.7
ybab/ebfc family nucleoid-associated proteinFEZ46_10595Not AvailablePositive2111312 - 211161111037.3
ydcf family proteinFEZ46_10600Not AvailablePositive2111910 - 211311845202.3
valine--trna ligaseFEZ46_10605Not AvailablePositive2113320 - 2115983101233.0
mfs transporterFEZ46_10610Not AvailablePositive2116060 - 211730145648.5
50s ribosomal protein l32FEZ46_10615Not AvailablePositive2117400 - 21175676316.61
50s ribosomal protein l33FEZ46_10620Not AvailablePositive2117586 - 21177356007.41
transposaseFEZ46_10625Not AvailablePositive2118540 - 211885312432.2
atp-dependent clp protease atp-binding subunitFEZ46_10645Not AvailableNegative2119691 - 212180577827.6
magnesium transporter cora family proteinFEZ46_10660Not AvailableNegative2122817 - 212372534479.7

Displaying genes 2081 – 2090 of 2318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.