Lactococcus raffinolactis strain FAM 23217

Gram-positiveCocciFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Pseudolactococcus

Description

Lactococcus raffinolactis strain FAM 23217 is a Gram-positive, facultative anaerobic bacterium characterized by its cocci shape. This strain is notably found in a variety of fermented environments, including fermented cabbage, kimchi, fish, meat, milk, vegetables, and other fermented foods. The versatility in its habitat suggests a robust ability to thrive in diverse fermentation processes, which is essential for food preservation and flavor enhancement. With a single replicon, Lactococcus raffinolactis strain FAM 23217 reflects a streamlined genomic organization, potentially contributing to its adaptability in various ecological niches. The presence of flagella indicates motility, which may aid in colonization or movement within its environments, although the ecological implications of this feature in non-aquatic habitats are unclear. This strain is also associated with the host Gambeya albida, suggesting specific ecological interactions that could influence fermentation dynamics in its native habitats. The ability to ferment a wide range of substrates underscores its potential utility in food production and biotechnological applications, particularly in the fermentation of plant-based and animal-based products. Overall, Lactococcus raffinolactis strain FAM 23217 exemplifies the diversity of lactic acid bacteria in fermented ecosystems, highlighting its role in food preservation and flavor development, as well as its interactions with specific hosts and environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusPseudolactococcus
SpeciesPseudolactococcus raffinolactis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Lactococcus raffinolactis strain FAM 23217
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables
Biotic relationshipNot Available
Host(s)Gambeya albida
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactococcus raffinolactis strain FAM 23217 FAM23217_scf0074, whole

Gene Summary

Adenine Count

717722 bp

Thymine Count

699365 bp

Guanine Count

479398 bp

Cytosine Count

450611 bp

Genome Length

2347098 bp

Protein-coding Genes

2153 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-protecting protein dpraFEZ46_00120Not AvailablePositive22869 - 2372032075.0
phosphoribosylamine--glycine ligaseFEZ46_00125Not AvailablePositive23854 - 2510744748.1
5-(carboxyamino)imidazole ribonucleotide mutaseFEZ46_00130Not AvailablePositive25100 - 2559417359.0
5-(carboxyamino)imidazole ribonucleotide synthaseFEZ46_00135Not AvailablePositive25587 - 2664538427.2
adenylosuccinate lyaseFEZ46_00140Not AvailablePositive26676 - 2796849060.4
potassium transporter kupFEZ46_00145Not AvailablePositive28220 - 3018473231.7
laci family transcriptional regulatorFEZ46_00155Not AvailableNegative31111 - 3206735203.3
sucrose-6-phosphate hydrolaseFEZ46_00160Not AvailableNegative32106 - 3357854480.6
pts beta-glucoside transporter subunit iibcaFEZ46_00165Not AvailablePositive33783 - 3572967538.7
rok family proteinFEZ46_00170Not AvailablePositive35840 - 3672131867.9

Displaying genes 171 – 180 of 2318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.