Lactococcus raffinolactis strain FAM 23217

Gram-positiveCocciFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Pseudolactococcus

Description

Lactococcus raffinolactis strain FAM 23217 is a Gram-positive, facultative anaerobic bacterium characterized by its cocci shape. This strain is notably found in a variety of fermented environments, including fermented cabbage, kimchi, fish, meat, milk, vegetables, and other fermented foods. The versatility in its habitat suggests a robust ability to thrive in diverse fermentation processes, which is essential for food preservation and flavor enhancement. With a single replicon, Lactococcus raffinolactis strain FAM 23217 reflects a streamlined genomic organization, potentially contributing to its adaptability in various ecological niches. The presence of flagella indicates motility, which may aid in colonization or movement within its environments, although the ecological implications of this feature in non-aquatic habitats are unclear. This strain is also associated with the host Gambeya albida, suggesting specific ecological interactions that could influence fermentation dynamics in its native habitats. The ability to ferment a wide range of substrates underscores its potential utility in food production and biotechnological applications, particularly in the fermentation of plant-based and animal-based products. Overall, Lactococcus raffinolactis strain FAM 23217 exemplifies the diversity of lactic acid bacteria in fermented ecosystems, highlighting its role in food preservation and flavor development, as well as its interactions with specific hosts and environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusPseudolactococcus
SpeciesPseudolactococcus raffinolactis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Lactococcus raffinolactis strain FAM 23217
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables
Biotic relationshipNot Available
Host(s)Gambeya albida
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactococcus raffinolactis strain FAM 23217 FAM23217_scf0074, whole

Gene Summary

Adenine Count

717722 bp

Thymine Count

699365 bp

Guanine Count

479398 bp

Cytosine Count

450611 bp

Genome Length

2347098 bp

Protein-coding Genes

2153 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spx/mgsr family rna polymerase-binding regulatory proteinFEZ46_08045Not AvailablePositive1631597 - 163201916482.1
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolaseFEZ46_08050Not AvailablePositive1632182 - 163303030294.0
exodeoxyribonuclease vii large subunitFEZ46_08055Not AvailablePositive1633082 - 163441049773.8
exodeoxyribonuclease vii small subunitFEZ46_08060Not AvailablePositive1634403 - 16346217882.49
polyprenyl synthetase family proteinFEZ46_08065Not AvailablePositive1634611 - 163548331095.5
tlya family rna methyltransferaseFEZ46_08070Not AvailablePositive1635476 - 163629729818.1
argr family transcriptional regulatorFEZ46_08075Not AvailablePositive1636284 - 163671816208.6
dna repair protein recnFEZ46_08080Not AvailablePositive1636888 - 163855561730.4
glutamate 5-kinaseFEZ46_08085Not AvailablePositive1638560 - 163936029117.3
aminoacyltransferaseFEZ46_08090Not AvailablePositive1639290 - 164056748860.2

Displaying genes 1581 – 1590 of 2318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.