Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna packaging protein | SAMEA3710568_04218 | Not Available | Negative | 4107966 - 4109876 | 72301.6 |
| Gp1 | SAMEA3710568_04219 | Not Available | Negative | 4109848 - 4110171 | 11912.6 |
| Putative terminase large subunit | SAMEA3710568_04383 | Not Available | Positive | 4263055 - 4263594 | 19951.2 |
| Putative terminase large subunit | SAMEA3710568_04384 | Not Available | Positive | 4263582 - 4263815 | 8797.62 |
| Putative portal protein | SAMEA3710568_04385 | Not Available | Positive | 4263815 - 4265281 | 54921.1 |
| Putative head morphogenesis protein | SAMEA3710568_04386 | Not Available | Positive | 4265457 - 4265915 | 16627.9 |
| Gp27 putative head protein | SAMEA3710568_04387 | Not Available | Positive | 4265919 - 4267139 | 44429.2 |
| Hypothetical protein | SAMEA3710568_04388 | Not Available | Positive | 4267143 - 4267499 | 12722.1 |
| Major capsid protein | SAMEA3710568_04389 | Not Available | Positive | 4267644 - 4268585 | 34175.4 |
| Hypothetical protein | SAMEA3710568_04390 | Not Available | Positive | 4268627 - 4268872 | 9187.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





