Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | SAMEA3710568_00676 | Not Available | Positive | 631243 - 634344 | 117147.0 |
| laci-type transcriptional regulator | SAMEA3710568_00677 | Not Available | Positive | 634441 - 634998 | 20174.6 |
| laci-type transcriptional regulator | SAMEA3710568_00678 | Not Available | Positive | 634965 - 635423 | 16243.6 |
| abc transporter atp-binding protein | SAMEA3710568_00679 | Not Available | Positive | 635446 - 636957 | 55127.9 |
| transport system permease | SAMEA3710568_00680 | Not Available | Positive | 636982 - 637980 | 34593.8 |
| oxidoreductase | SAMEA3710568_00681 | Not Available | Positive | 638046 - 639107 | 38054.1 |
| aldose 1-epimerase family protein | SAMEA3710568_00682 | Not Available | Positive | 639119 - 639991 | 32748.2 |
| putative inner membrane protein yqjf | SAMEA3710568_00683 | Not Available | Negative | 640039 - 640461 | 15212.3 |
| phenylpropionate dioxygenase ferredoxin reductase subunit | SAMEA3710568_00684 | Not Available | Negative | 640558 - 641253 | 25421.4 |
| phenylpropionate dioxygenase ferredoxin reductase subunit | SAMEA3710568_00685 | Not Available | Negative | 641250 - 641765 | 18717.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





