Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter periplasmic peptide-binding protein | SAMEA3710568_00644 | Not Available | Negative | 596857 - 598500 | 61551.2 |
| protein of uncharacterised function (duf2543) | SAMEA3710568_00645 | Not Available | Negative | 598813 - 599058 | 9321.8 |
| putative amino acid/amine transport protein | SAMEA3710568_00646 | Not Available | Negative | 599192 - 600577 | 50869.9 |
| glutamine synthetase | SAMEA3710568_00647 | Not Available | Negative | 600880 - 602298 | 53143.1 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | SAMEA3710568_00648 | Not Available | Positive | 602510 - 603274 | 28127.8 |
| dna-binding transcriptional repressor puur | SAMEA3710568_00649 | Not Available | Positive | 603301 - 603858 | 20092.8 |
| gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase | SAMEA3710568_00650 | Not Available | Positive | 604008 - 605495 | 53396.5 |
| gamma-glutamylputrescine oxidoreductase | SAMEA3710568_00651 | Not Available | Positive | 605497 - 606777 | 47136.3 |
| 4-aminobutyrate transaminase | SAMEA3710568_00652 | Not Available | Positive | 606815 - 608080 | 44779.7 |
| psp operon transcriptional activator | SAMEA3710568_00653 | Not Available | Negative | 608200 - 609177 | 36989.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





