Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridylate synthase b | SAMEA3710568_00613 | Not Available | Positive | 568258 - 569130 | 32629.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMEA3710568_00614 | Not Available | Negative | 569170 - 569760 | 22042.2 |
| short chain dehydrogenase | SAMEA3710568_00615 | Not Available | Negative | 569757 - 570515 | 27976.7 |
| putative periplasmic protease | SAMEA3710568_00616 | Not Available | Positive | 570735 - 571784 | 39368.7 |
| protein of uncharacterised function (duf2498) | SAMEA3710568_00617 | Not Available | Negative | 571820 - 572071 | 9386.17 |
| dna topoisomerase | SAMEA3710568_00618 | Not Available | Positive | 572451 - 575048 | 97372.1 |
| transcriptional regulator cysb | SAMEA3710568_00619 | Not Available | Positive | 575258 - 576232 | 36162.6 |
| uncharacterised protein | SAMEA3710568_00620 | Not Available | Positive | 576563 - 576691 | 4866.05 |
| uncharacterised protein | SAMEA3710568_00621 | Not Available | Positive | 576694 - 576861 | 6334.2 |
| aconitate hydrase 1 | SAMEA3710568_00623 | Not Available | Positive | 577234 - 579909 | 97753.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





