Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | SAMEA3710568_00560 | Not Available | Positive | 517215 - 519863 | 96413.5 |
| ribosome-binding factor a | SAMEA3710568_00561 | Not Available | Positive | 520027 - 520428 | 15155.4 |
| trna pseudouridine synthase b | SAMEA3710568_00562 | Not Available | Positive | 520428 - 521372 | 35071.1 |
| polynucleotide phosphorylase/polyadenylase | SAMEA3710568_00565 | Not Available | Positive | 522037 - 524172 | 77120.6 |
| lipoprotein nlpi | SAMEA3710568_00566 | Not Available | Positive | 524281 - 525165 | 33622.5 |
| atp-dependent rna helicase dead | SAMEA3710568_00567 | Not Available | Positive | 525345 - 527234 | 70550.5 |
| tryptophan permease | SAMEA3710568_00568 | Not Available | Positive | 527388 - 528632 | 44335.2 |
| limonene 1,2-monooxygenase | SAMEA3710568_00569 | Not Available | Negative | 528750 - 529757 | 37215.6 |
| peptidase u32 | SAMEA3710568_00570 | Not Available | Negative | 529838 - 530716 | 32438.0 |
| collagenase | SAMEA3710568_00571 | Not Available | Negative | 530725 - 531720 | 37007.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





