Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| octaprenyl diphosphate synthase | SAMEA3710568_00538 | Not Available | Negative | 498548 - 499519 | 35219.1 |
| 50s ribosomal protein l21 | SAMEA3710568_00539 | Not Available | Positive | 499777 - 500088 | 11565.0 |
| 50s ribosomal protein l27 | SAMEA3710568_00540 | Not Available | Positive | 500109 - 500366 | 9125.01 |
| putative transporter | SAMEA3710568_00541 | Not Available | Positive | 500493 - 501458 | 34965.2 |
| gtpase obge | SAMEA3710568_00542 | Not Available | Positive | 501474 - 502646 | 43230.2 |
| d-alanyl-d-alanine carboxypeptidase | SAMEA3710568_00543 | Not Available | Negative | 502832 - 504265 | 51816.4 |
| transcription elongation factor grea | SAMEA3710568_00545 | Not Available | Positive | 504513 - 504989 | 17642.0 |
| rna-binding protein yhby | SAMEA3710568_00546 | Not Available | Negative | 505145 - 505438 | 10784.4 |
| 23s rrna methyltransferase j | SAMEA3710568_00547 | Not Available | Positive | 505564 - 506193 | 23336.4 |
| atp-dependent metalloprotease | SAMEA3710568_00548 | Not Available | Positive | 506284 - 508227 | 71045.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





