Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose 5-phosphate isomerase | SAMEA3710568_00528 | Not Available | Negative | 490990 - 491976 | 35228.3 |
| putative calcium/sodium:proton antiporter | SAMEA3710568_00529 | Not Available | Negative | 491990 - 492955 | 34286.4 |
| putative abc transporter atp-binding protein yrbf | SAMEA3710568_00530 | Not Available | Positive | 493165 - 493974 | 29128.6 |
| toluene abc transporter permease | SAMEA3710568_00531 | Not Available | Positive | 493982 - 494764 | 27865.0 |
| mce family protein | SAMEA3710568_00532 | Not Available | Positive | 494769 - 495320 | 19567.3 |
| toluene tolerance protein ttg2d | SAMEA3710568_00533 | Not Available | Positive | 495339 - 495974 | 23964.0 |
| putative ntp binding protein (contains stas domain) | SAMEA3710568_00534 | Not Available | Positive | 495974 - 496267 | 10681.0 |
| bola/yrba family protein | SAMEA3710568_00535 | Not Available | Positive | 496412 - 496681 | 10038.0 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMEA3710568_00536 | Not Available | Positive | 496736 - 497995 | 44820.4 |
| dna-binding transcriptional regulator nlp | SAMEA3710568_00537 | Not Available | Negative | 498043 - 498321 | 10495.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





