Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repressor protein for ftsi | SAMEA3710568_00456 | Not Available | Positive | 419621 - 421033 | 51834.1 |
| protein ygiq | SAMEA3710568_00457 | Not Available | Positive | 421144 - 423363 | 83497.6 |
| putative outer membrane lipoprotein | SAMEA3710568_00458 | Not Available | Negative | 423406 - 423663 | 9513.58 |
| protein of uncharacterised function (duf3828) | SAMEA3710568_00459 | Not Available | Negative | 423714 - 424640 | 35036.1 |
| 2,5-diketo-d-gluconate reductase a | SAMEA3710568_00460 | Not Available | Negative | 424840 - 425667 | 31110.4 |
| alcohol dehydrogenase yqhd | SAMEA3710568_00461 | Not Available | Negative | 425772 - 426935 | 42143.5 |
| arac-type regulatory protein | SAMEA3710568_00462 | Not Available | Positive | 427072 - 428028 | 36030.9 |
| inner membrane protein yghb | SAMEA3710568_00463 | Not Available | Negative | 428068 - 428727 | 24066.2 |
| cystathionine beta-lyase | SAMEA3710568_00464 | Not Available | Negative | 428867 - 430054 | 43219.8 |
| biopolymer transport protein exbb | SAMEA3710568_00465 | Not Available | Positive | 430306 - 431040 | 26315.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





