Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinol monooxygenase ygin | SAMEA3710568_00446 | Not Available | Negative | 411139 - 411453 | 11533.1 |
| modulator of drug activity b | SAMEA3710568_00447 | Not Available | Negative | 411484 - 412065 | 21979.2 |
| putative sensor protein | SAMEA3710568_00448 | Not Available | Negative | 412762 - 414036 | 47552.5 |
| dna-binding transcriptional regulator qseb | SAMEA3710568_00449 | Not Available | Negative | 414033 - 414692 | 24690.1 |
| protein ygiw precursor | SAMEA3710568_00450 | Not Available | Positive | 414844 - 415236 | 14039.6 |
| transcription activator effector binding domain/dna gyrase inhibitor domain-containing protein | SAMEA3710568_00451 | Not Available | Positive | 415289 - 415771 | 17814.3 |
| uncharacterised protein | SAMEA3710568_00452 | Not Available | Positive | 415771 - 415989 | 8362.96 |
| uncharacterised protein | SAMEA3710568_00453 | Not Available | Positive | 416090 - 416179 | 3211.84 |
| dna topoisomerase iv subunit a | SAMEA3710568_00454 | Not Available | Positive | 416317 - 418575 | 83836.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMEA3710568_00455 | Not Available | Positive | 418809 - 419546 | 27424.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





