Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc transporter zupt | SAMEA3710568_00436 | Not Available | Negative | 401272 - 402045 | 26502.6 |
| dioxygenase | SAMEA3710568_00437 | Not Available | Positive | 402161 - 402976 | 29915.1 |
| glutathionylspermidine synthase | SAMEA3710568_00438 | Not Available | Negative | 403014 - 404174 | 45042.4 |
| protein of uncharacterised function (duf1190) | SAMEA3710568_00439 | Not Available | Negative | 404180 - 404851 | 23480.7 |
| outer membrane channel protein | SAMEA3710568_00440 | Not Available | Negative | 404999 - 406480 | 53801.8 |
| adp-ribose pyrophosphatase nudf | SAMEA3710568_00441 | Not Available | Positive | 406685 - 407314 | 23668.2 |
| dehydrogenase | SAMEA3710568_00442 | Not Available | Positive | 407315 - 407737 | 16549.0 |
| cyclic 3',5'-adenosine monophosphate phosphodiesterase | SAMEA3710568_00443 | Not Available | Positive | 407762 - 408589 | 30897.6 |
| esterase yqia | SAMEA3710568_00444 | Not Available | Positive | 408589 - 409170 | 21642.7 |
| dna topoisomerase iv subunit b | SAMEA3710568_00445 | Not Available | Positive | 409199 - 411091 | 70189.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





