Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3710568_03754 | Not Available | Negative | 3661669 - 3661899 | 8812.31 |
| Putative coat protein | SAMEA3710568_03755 | Not Available | Negative | 3661944 - 3663239 | 46844.4 |
| Capsid and scaffolding protein | SAMEA3710568_03756 | Not Available | Negative | 3663239 - 3664150 | 33917.8 |
| Portal protein | SAMEA3710568_03757 | Not Available | Negative | 3664164 - 3666329 | 82511.2 |
| Terminase large subunit | SAMEA3710568_03758 | Not Available | Negative | 3666330 - 3667385 | 40507.3 |
| Outer membrane protein lom precursor | SAMEA3710568_03785 | Not Available | Negative | 3694279 - 3694878 | 21781.0 |
| Putative tail tip assembly protein | SAMEA3710568_03786 | Not Available | Negative | 3694946 - 3698425 | 127339.0 |
| Tail assembly protein | SAMEA3710568_03787 | Not Available | Negative | 3698486 - 3699028 | 18767.8 |
| Tail fiber component | SAMEA3710568_03788 | Not Available | Negative | 3699025 - 3699624 | 22941.1 |
| Tail component | SAMEA3710568_03789 | Not Available | Negative | 3699773 - 3700471 | 25902.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





