Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump phosphatase | SAMEA3710568_00405 | Not Available | Negative | 370891 - 371136 | 8712.51 |
| n-acetylglucosamine repressor | SAMEA3710568_00406 | Not Available | Negative | 371184 - 372404 | 44544.0 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMEA3710568_00407 | Not Available | Negative | 372413 - 373561 | 41009.5 |
| glucosamine-6-phosphate deaminase | SAMEA3710568_00408 | Not Available | Negative | 373621 - 374421 | 29793.9 |
| pts system n-acetyl glucosamine specific transporter subunit iiabc | SAMEA3710568_00409 | Not Available | Positive | 374754 - 376700 | 68336.9 |
| uncharacterised protein | SAMEA3710568_00410 | Not Available | Negative | 376670 - 376792 | 4648.64 |
| glutaminyl-trna synthetase | SAMEA3710568_00411 | Not Available | Positive | 376903 - 378567 | 63479.3 |
| outer membrane porin, oprd family | SAMEA3710568_00412 | Not Available | Positive | 379146 - 380552 | 52822.9 |
| putative lipoprotein | SAMEA3710568_00413 | Not Available | Positive | 380589 - 380915 | 12017.3 |
| ferric uptake regulator | SAMEA3710568_00414 | Not Available | Negative | 380999 - 381445 | 16795.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





