Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna-packaging protein | SAMEA3710568_04823 | Not Available | Negative | 4615203 - 4615604 | 14404.0 |
| serine protease | SAMEA3710568_04824 | Not Available | Positive | 4619554 - 4620300 | 26458.0 |
| is911 orfa | SAMEA3710568_04825 | Not Available | Positive | 4620457 - 4621437 | 35276.1 |
| is911 orf2 | SAMEA3710568_04826 | Not Available | Negative | 4621412 - 4621786 | 14572.1 |
| lysr family transcriptional regulator | SAMEA3710568_04827 | Not Available | Positive | 4622147 - 4622818 | 25332.7 |
| putative transporter | SAMEA3710568_04828 | Not Available | Negative | 4622819 - 4623256 | 16450.9 |
| putative cadaverine/lysine antiporter | SAMEA3710568_04829 | Not Available | Negative | 4623508 - 4624560 | 36182.8 |
| bacteriophage protein | SAMEA3710568_04830 | Not Available | Positive | 4625022 - 4625564 | 19330.2 |
| is100 orf2 | SAMEA3710568_04831 | Not Available | Negative | 4626542 - 4626775 | 8875.8 |
| protein encoded within is | SAMEA3710568_04832 | Not Available | Negative | 4626816 - 4627319 | 18717.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





