Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-diketo-l-gulonate trap transporter small permease yiam | SAMEA3710568_04800 | Not Available | Negative | 4600399 - 4600701 | 11069.6 |
| transposase is3/is911 family protein | SAMEA3710568_04801 | Not Available | Negative | 4601009 - 4601287 | 10528.4 |
| putative transcriptional regulator | SAMEA3710568_04802 | Not Available | Negative | 4601763 - 4602440 | 24819.8 |
| bacteriophage protein | SAMEA3710568_04803 | Not Available | Positive | 4602989 - 4603276 | 10668.4 |
| tail fiber assembly protein | SAMEA3710568_04804 | Not Available | Positive | 4603279 - 4603824 | 20696.2 |
| 2,5-diketo-d-gluconate reductase b | SAMEA3710568_04805 | Not Available | Negative | 4604489 - 4605292 | 29493.5 |
| Trna-asp | Not Available | Not Available | Positive | 4605455 - 4605531 | Not Available |
| putative release factor h-coupled rctb family protein | SAMEA3710568_04808 | Not Available | Negative | 4606080 - 4606520 | 16786.4 |
| parb domain-containing protein nuclease | SAMEA3710568_04809 | Not Available | Negative | 4606748 - 4607386 | 24159.0 |
| is2 orf2 | SAMEA3710568_04810 | Not Available | Positive | 4607706 - 4608248 | 20463.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





