Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | SAMEA3710568_04780 | Not Available | Positive | 4587551 - 4588156 | 23109.2 |
| flp pilus assembly protein, pilin flp | SAMEA3710568_04781 | Not Available | Positive | 4588291 - 4588530 | 8475.21 |
| putative tight adherance operon protein | SAMEA3710568_04782 | Not Available | Positive | 4588620 - 4589063 | 16190.8 |
| issfl4 orf3 | SAMEA3710568_04783 | Not Available | Positive | 4589565 - 4589942 | 14577.2 |
| integrase | SAMEA3710568_04784 | Not Available | Positive | 4590011 - 4590325 | 12256.7 |
| is911 orf2 | SAMEA3710568_04785 | Not Available | Negative | 4590377 - 4590751 | 14572.1 |
| issfl4 orf3 | SAMEA3710568_04786 | Not Available | Negative | 4590797 - 4591288 | 18928.5 |
| 23s rrna methylase leader peptide (ermc) | SAMEA3710568_04787 | Not Available | Positive | 4591523 - 4591618 | 3803.68 |
| dimethyladenosine transferase | SAMEA3710568_04788 | Not Available | Positive | 4591744 - 4592481 | 28813.1 |
| uncharacterised protein | SAMEA3710568_04789 | Not Available | Positive | 4592486 - 4592596 | 4048.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





