Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 4582127 - 4582201 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 4582205 - 4582279 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 4582282 - 4582358 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 4582360 - 4582436 | Not Available |
| putative bacteriophage protein | SAMEA3710568_04774 | Not Available | Negative | 4582626 - 4583048 | 16195.2 |
| phage integrase | SAMEA3710568_04775 | Not Available | Negative | 4583375 - 4584100 | 28352.4 |
| valyl-trna synthetase | SAMEA3710568_04776 | Not Available | Negative | 4584327 - 4584632 | 12120.4 |
| bacteriophage protein | SAMEA3710568_04777 | Not Available | Negative | 4584632 - 4585009 | 14141.6 |
| putative dna replication protein | SAMEA3710568_04778 | Not Available | Negative | 4585698 - 4586444 | 28002.9 |
| putative bacteriophage protein | SAMEA3710568_04779 | Not Available | Negative | 4586451 - 4587089 | 23266.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





