Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transport protein | SAMEA3710568_04734 | Not Available | Negative | 4555216 - 4555608 | 13876.2 |
| bifunctional d-altronate/d-mannonate dehydratase | SAMEA3710568_04735 | Not Available | Negative | 4555675 - 4556889 | 45765.8 |
| invasion plasmid gene product | SAMEA3710568_04736 | Not Available | Negative | 4557429 - 4558793 | 50098.0 |
| s-type pyocin domain protein | SAMEA3710568_04737 | Not Available | Negative | 4558991 - 4559266 | 10376.6 |
| ospc3 | SAMEA3710568_04738 | Not Available | Positive | 4560246 - 4561700 | 55553.5 |
| ospg | SAMEA3710568_04739 | Not Available | Negative | 4562733 - 4563323 | 22571.7 |
| uncharacterised protein | SAMEA3710568_04740 | Not Available | Negative | 4563352 - 4563501 | 5174.17 |
| uncharacterised protein | SAMEA3710568_04741 | Not Available | Negative | 4563689 - 4563844 | 6004.17 |
| uncharacterised protein | SAMEA3710568_04742 | Not Available | Negative | 4563831 - 4563926 | 3432.13 |
| prophage protein | SAMEA3710568_04743 | Not Available | Negative | 4565394 - 4566050 | 24046.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





