Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trans-aconitate 2-methyltransferase | SAMEA3710568_04669 | Not Available | Positive | 4498920 - 4499678 | 28989.3 |
| predicted membrane protein | SAMEA3710568_04670 | Not Available | Negative | 4499682 - 4500476 | 29946.8 |
| putative long polar fimbriae | SAMEA3710568_04671 | Not Available | Positive | 4501053 - 4503575 | 92926.8 |
| long polar fimbrial operon protein lpfd | SAMEA3710568_04672 | Not Available | Positive | 4503586 - 4503798 | 7857.63 |
| Trna-thr | Not Available | Not Available | Positive | 4503980 - 4504055 | Not Available |
| amino acid abc transporter atp-binding protein | SAMEA3710568_04676 | Not Available | Negative | 4504273 - 4505031 | 28617.1 |
| transport system permease | SAMEA3710568_04677 | Not Available | Negative | 4505039 - 4506142 | 41455.7 |
| polar amino acid abc transporter inner membrane subunit | SAMEA3710568_04678 | Not Available | Negative | 4506152 - 4506763 | 22184.8 |
| putative bacteriophage protein | SAMEA3710568_04680 | Not Available | Negative | 4508148 - 4508513 | 13435.2 |
| valyl-trna synthetase | SAMEA3710568_04681 | Not Available | Negative | 4508513 - 4509178 | 24372.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





