Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is150 orf1 | SAMEA3710568_04635 | Not Available | Negative | 4471338 - 4471859 | 19694.1 |
| is100 orf2 | SAMEA3710568_04636 | Not Available | Positive | 4471960 - 4472280 | 12290.9 |
| virf | SAMEA3710568_04637 | Not Available | Negative | 4472222 - 4472926 | 27176.9 |
| ospe2 | SAMEA3710568_04638 | Not Available | Positive | 4474022 - 4474288 | 10016.0 |
| oligogalacturonate-specific porin protein kdgm | SAMEA3710568_04639 | Not Available | Negative | 4474657 - 4474830 | 6169.56 |
| glucosamine/galactosamine-6-phosphate isomerase | SAMEA3710568_04640 | Not Available | Negative | 4475231 - 4475932 | 25946.4 |
| n-acetylgalactosamine permease iid component | SAMEA3710568_04641 | Not Available | Negative | 4475987 - 4476778 | 28961.1 |
| n-acetylgalactosamine-specific transport iic component 1 | SAMEA3710568_04642 | Not Available | Negative | 4476768 - 4477571 | 28674.6 |
| pts system mannose/fructose/sorbose family transporter subunit iib | SAMEA3710568_04643 | Not Available | Negative | 4477610 - 4477804 | 7205.52 |
| plasmid maintenance protein ccdb | SAMEA3710568_04644 | Not Available | Negative | 4479196 - 4479501 | 11737.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





