Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isovaleryl coa dehydrogenase | SAMEA3710568_04615 | Not Available | Negative | 4456758 - 4458122 | 50951.6 |
| synthetase/amidase | SAMEA3710568_04616 | Not Available | Negative | 4458206 - 4459369 | 45041.0 |
| protein of uncharacterised function (duf1190) | SAMEA3710568_04617 | Not Available | Negative | 4459372 - 4460010 | 23491.1 |
| inner membrane protein yjfl | SAMEA3710568_04618 | Not Available | Negative | 4460020 - 4460256 | 8179.23 |
| putative excisionase (duf1233) | SAMEA3710568_04619 | Not Available | Negative | 4460521 - 4460718 | 7257.83 |
| putative bacteriophage protein | SAMEA3710568_04620 | Not Available | Negative | 4460727 - 4460873 | 5909.12 |
| uncharacterised protein | SAMEA3710568_04621 | Not Available | Negative | 4460877 - 4461119 | 9592.59 |
| bacteriophage protein | SAMEA3710568_04622 | Not Available | Negative | 4461124 - 4461246 | 4400.35 |
| bacteriophage protein | SAMEA3710568_04623 | Not Available | Negative | 4461243 - 4461812 | 21373.1 |
| bacteriophage protein | SAMEA3710568_04624 | Not Available | Negative | 4461809 - 4462558 | 28364.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





