Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 4435062 - 4435137 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4435141 - 4435215 | Not Available |
| lysis protein s | SAMEA3710568_04586 | Not Available | Positive | 4435508 - 4435723 | 7865.48 |
| issfl3 orfa | SAMEA3710568_04587 | Not Available | Positive | 4435822 - 4436496 | 25728.0 |
| issfl3 orfb | SAMEA3710568_04588 | Not Available | Positive | 4436493 - 4436705 | 7916.89 |
| is629 orf2 | SAMEA3710568_04589 | Not Available | Negative | 4436708 - 4437319 | 22711.9 |
| invasion plasmid antigen | SAMEA3710568_04590 | Not Available | Positive | 4437414 - 4439225 | 69123.2 |
| tail fiber assembly protein | SAMEA3710568_04591 | Not Available | Negative | 4439226 - 4439405 | 6487.7 |
| prophage tail protein | SAMEA3710568_04592 | Not Available | Negative | 4439405 - 4440022 | 23393.4 |
| transposase family | SAMEA3710568_04593 | Not Available | Positive | 4440088 - 4440390 | 11180.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





