Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriophage protein | SAMEA3710568_04562 | Not Available | Positive | 4424635 - 4425093 | 17262.5 |
| crossover junction endodeoxyribonuclease rusa | SAMEA3710568_04563 | Not Available | Positive | 4425106 - 4425462 | 13538.7 |
| antitermination protein q | SAMEA3710568_04564 | Not Available | Positive | 4425477 - 4426298 | 30687.0 |
| Trna-met | Not Available | Not Available | Positive | 4426443 - 4426518 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 4426620 - 4426696 | Not Available |
| enhancing lycopene biosynthesis protein 1 | SAMEA3710568_04568 | Not Available | Negative | 4427608 - 4427943 | 12769.6 |
| yjhs | SAMEA3710568_04569 | Not Available | Positive | 4428203 - 4428391 | 6667.95 |
| yjhs | SAMEA3710568_04570 | Not Available | Positive | 4428388 - 4428549 | 5625.81 |
| lysis protein s | SAMEA3710568_04571 | Not Available | Positive | 4428699 - 4428878 | 6607.96 |
| uncharacterised protein | SAMEA3710568_04573 | Not Available | Positive | 4429440 - 4429907 | 17706.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





