Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative arac-type dna-binding domain-containing protein | SAMEA3710568_04501 | Not Available | Negative | 4371553 - 4371762 | 8071.6 |
| rna 2'-phosphotransferase-like protein | SAMEA3710568_04502 | Not Available | Negative | 4372242 - 4372826 | 21606.0 |
| putative transporter | SAMEA3710568_04503 | Not Available | Positive | 4373076 - 4373759 | 23832.9 |
| inner membrane protein yjig | SAMEA3710568_04504 | Not Available | Positive | 4373756 - 4374217 | 16252.5 |
| isoaspartyl dipeptidase | SAMEA3710568_04505 | Not Available | Positive | 4374230 - 4375402 | 41090.4 |
| putative dna-binding transcriptional regulator | SAMEA3710568_04506 | Not Available | Positive | 4375467 - 4376378 | 34755.6 |
| dna replication/recombination/repair protein | SAMEA3710568_04507 | Not Available | Negative | 4376371 - 4376763 | 14773.8 |
| outer membrane usher protein, type 1 fimbrial synthesis | SAMEA3710568_04508 | Not Available | Negative | 4377281 - 4377547 | 9565.52 |
| putative fimbrial protein remnant | SAMEA3710568_04509 | Not Available | Negative | 4377565 - 4378644 | 40536.8 |
| possible chaperone | SAMEA3710568_04510 | Not Available | Negative | 4378688 - 4379449 | 28276.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





