Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 orfa | SAMEA3710568_04470 | Not Available | Negative | 4341656 - 4341844 | 7207.6 |
| ospd3 | SAMEA3710568_04471 | Not Available | Positive | 4341920 - 4343617 | 63185.1 |
| aec51 | SAMEA3710568_04472 | Not Available | Positive | 4343734 - 4343856 | 4686.82 |
| uncharacterised protein | SAMEA3710568_04473 | Not Available | Positive | 4344020 - 4344292 | 10816.8 |
| prophage tail protein | SAMEA3710568_04474 | Not Available | Positive | 4344835 - 4345200 | 14056.6 |
| chelated iron transport system membrane protein yfed | SAMEA3710568_04475 | Not Available | Negative | 4345401 - 4346258 | 30644.8 |
| iron/manganese transport system inner membrane protein sitc | SAMEA3710568_04476 | Not Available | Negative | 4346255 - 4347112 | 30815.6 |
| iron/manganese transport system inner membrane protein sitb | SAMEA3710568_04477 | Not Available | Negative | 4347109 - 4347936 | 30076.5 |
| iron transport protein, periplasmic-binding protein | SAMEA3710568_04478 | Not Available | Negative | 4347936 - 4348850 | 33474.2 |
| putative transposase | SAMEA3710568_04479 | Not Available | Negative | 4349282 - 4349887 | 23223.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





