Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructoselysine 3-epimerase | SAMEA3710568_00313 | Not Available | Positive | 281227 - 282057 | 31122.6 |
| fructoselysine 6-kinase | SAMEA3710568_00314 | Not Available | Positive | 282054 - 282656 | 21861.7 |
| dna-binding transcriptional regulator frlr | SAMEA3710568_00315 | Not Available | Positive | 282939 - 283670 | 27838.2 |
| methionine gamma-lyase | SAMEA3710568_00316 | Not Available | Negative | 283830 - 284915 | 38564.6 |
| putative transport system permease | SAMEA3710568_00317 | Not Available | Negative | 284927 - 286231 | 46428.1 |
| protein of uncharacterised function duf2620 | SAMEA3710568_00318 | Not Available | Negative | 286243 - 286596 | 12479.5 |
| putative hydrolase | SAMEA3710568_00319 | Not Available | Negative | 286607 - 287485 | 32931.4 |
| putative mutase | SAMEA3710568_00320 | Not Available | Negative | 287482 - 288708 | 44459.1 |
| alanine racemase family protein | SAMEA3710568_00321 | Not Available | Negative | 288709 - 289872 | 42448.9 |
| prd domain protein, ef_0829/aha_3910 family | SAMEA3710568_00322 | Not Available | Negative | 289956 - 290318 | 13605.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





