Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a biosynthesis lauroyl acyltransferase | SAMEA3710568_00242 | Not Available | Positive | 230647 - 231567 | 35422.9 |
| multidrug resistance protein mdtg | SAMEA3710568_00243 | Not Available | Positive | 231739 - 231936 | 7133.81 |
| bacteriophage protein | SAMEA3710568_00244 | Not Available | Positive | 231960 - 232892 | 35438.7 |
| issfl4 orf1 | SAMEA3710568_00245 | Not Available | Negative | 233211 - 233498 | 10906.2 |
| 50s ribosomal protein l17 | SAMEA3710568_00246 | Not Available | Negative | 233668 - 234051 | 14365.4 |
| dna-directed rna polymerase subunit alpha | SAMEA3710568_00247 | Not Available | Negative | 234092 - 235081 | 36513.9 |
| 30s ribosomal protein s4 | SAMEA3710568_00248 | Not Available | Negative | 235107 - 235727 | 23470.5 |
| 30s ribosomal protein s11 | SAMEA3710568_00249 | Not Available | Negative | 235761 - 236150 | 13845.7 |
| 50s ribosomal protein l36 | SAMEA3710568_00251 | Not Available | Negative | 236670 - 236786 | 4364.59 |
| preprotein translocase subunit secy | SAMEA3710568_00252 | Not Available | Negative | 236818 - 238149 | 48514.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





