Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter membrane protein | SAMEA3710568_00170 | Not Available | Positive | 164911 - 165705 | 29112.7 |
| spermidine/putrescine abc transporter substrate-binding protein | SAMEA3710568_00171 | Not Available | Positive | 165702 - 166748 | 38869.1 |
| nad-dependent deacetylase | SAMEA3710568_00172 | Not Available | Negative | 166904 - 167725 | 30925.1 |
| n-acetyl-d-glucosamine kinase | SAMEA3710568_00173 | Not Available | Negative | 167741 - 168652 | 32988.5 |
| outer membrane-specific lipoprotein transporter subunit lole | SAMEA3710568_00174 | Not Available | Negative | 168681 - 169919 | 45120.7 |
| lipoprotein transporter atp-binding subunit | SAMEA3710568_00175 | Not Available | Negative | 169925 - 170626 | 25376.9 |
| lipoprotein-releasing system transmembrane protein lolc | SAMEA3710568_00176 | Not Available | Negative | 170619 - 171818 | 43336.6 |
| putative acyltransferase | SAMEA3710568_00177 | Not Available | Positive | 172080 - 173153 | 40853.9 |
| transcription-repair coupling factor | SAMEA3710568_00178 | Not Available | Positive | 173233 - 176727 | 131805.0 |
| lysm domain/erfk/ybis/ycfs/ynhg family protein | SAMEA3710568_00179 | Not Available | Positive | 176873 - 177832 | 34520.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





