Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase | SAMEA3710568_00137 | Not Available | Negative | 137429 - 138679 | 45772.4 |
| 23s rrna pseudouridine synthase e | SAMEA3710568_00138 | Not Available | Positive | 138851 - 139504 | 24951.8 |
| hydrolase, nudix family | SAMEA3710568_00139 | Not Available | Positive | 139514 - 139975 | 17433.8 |
| putative trna(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the pp-loop atpase domain | SAMEA3710568_00140 | Not Available | Positive | 140029 - 141135 | 40960.8 |
| protein ycfc | SAMEA3710568_00141 | Not Available | Positive | 141171 - 141812 | 22895.9 |
| adenylosuccinate lyase | SAMEA3710568_00142 | Not Available | Positive | 141816 - 143186 | 51546.7 |
| cupin | SAMEA3710568_00166 | Not Available | Positive | 160291 - 161412 | 42567.2 |
| peptidase t | SAMEA3710568_00167 | Not Available | Negative | 161461 - 162687 | 44924.1 |
| putrescine/spermidine abc transporter atpase | SAMEA3710568_00168 | Not Available | Positive | 162937 - 164073 | 43030.8 |
| spermidine/putrescine abc transporter membrane protein | SAMEA3710568_00169 | Not Available | Positive | 164057 - 164914 | 32210.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





