Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | SAMEA3710568_00117 | Not Available | Negative | 112088 - 112822 | 28722.6 |
| ypda, sensory kinase in two-component system with ypdb | SAMEA3710568_00118 | Not Available | Negative | 112837 - 113958 | 42021.9 |
| aminotransferase | SAMEA3710568_00119 | Not Available | Positive | 114700 - 115938 | 46174.8 |
| heat shock protein | SAMEA3710568_00120 | Not Available | Negative | 116429 - 117349 | 35495.5 |
| inner membrane protein | SAMEA3710568_00121 | Not Available | Positive | 117702 - 117944 | 8923.5 |
| uncharacterised protein | SAMEA3710568_00122 | Not Available | Negative | 118021 - 118296 | 10238.6 |
| yfdx protein | SAMEA3710568_00123 | Not Available | Positive | 118593 - 119216 | 22552.0 |
| formyl-coenzyme a transferase | SAMEA3710568_00124 | Not Available | Positive | 119729 - 120979 | 45830.7 |
| putative oxalyl-coa decarboxylase | SAMEA3710568_00125 | Not Available | Positive | 121033 - 122727 | 60566.8 |
| putative transporter yfdv | SAMEA3710568_00126 | Not Available | Positive | 122797 - 123741 | 33617.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





