Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase ypea | SAMEA3710568_00067 | Not Available | Positive | 67977 - 68402 | 16326.6 |
| putative inner membrane protein yfez | SAMEA3710568_00068 | Not Available | Positive | 68389 - 68838 | 17117.2 |
| rpoe-regulated lipoprotein | SAMEA3710568_00069 | Not Available | Positive | 68899 - 69474 | 20928.8 |
| dyp-type peroxidase family protein | SAMEA3710568_00070 | Not Available | Positive | 69570 - 70469 | 33102.2 |
| pts system n-acetylmuramic acid transporter subunit iibc | SAMEA3710568_00071 | Not Available | Negative | 70649 - 72073 | 49791.0 |
| n-acetylmuramic acid 6-phosphate etherase | SAMEA3710568_00072 | Not Available | Negative | 72077 - 72973 | 31184.8 |
| rpir family transcriptional regulator | SAMEA3710568_00073 | Not Available | Positive | 73137 - 73937 | 29131.1 |
| short chain dehydrogenase | SAMEA3710568_00074 | Not Available | Positive | 74124 - 74915 | 27794.6 |
| thiosulfate transporter subunit | SAMEA3710568_00075 | Not Available | Positive | 75219 - 76235 | 37644.6 |
| sulfate/thiosulfate transporter subunit | SAMEA3710568_00076 | Not Available | Positive | 76235 - 77068 | 30310.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





