Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spfh domain/band 7 family protein | SAMEA3710568_00883 | Not Available | Positive | 842672 - 843589 | 33745.1 |
| nodulation efficiency family protein | SAMEA3710568_00884 | Not Available | Positive | 843586 - 844044 | 16939.8 |
| dna-binding transcriptional regulator cuer | SAMEA3710568_00885 | Not Available | Negative | 844045 - 844452 | 15236.0 |
| amino acid permease family protein | SAMEA3710568_00886 | Not Available | Negative | 844577 - 845869 | 45647.5 |
| glutaminase | SAMEA3710568_00887 | Not Available | Negative | 845872 - 846804 | 32877.2 |
| copper exporting atpase | SAMEA3710568_00888 | Not Available | Positive | 847066 - 849570 | 87985.4 |
| higa family addiction module antidote protein | SAMEA3710568_00889 | Not Available | Negative | 849785 - 850180 | 15262.6 |
| protein ybak / prolyl-trna synthetases associated domain protein | SAMEA3710568_00891 | Not Available | Positive | 851262 - 851741 | 17093.9 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase periplasmic | SAMEA3710568_00892 | Not Available | Negative | 851778 - 853430 | 60842.5 |
| fosmidomycin resistance protein | SAMEA3710568_00893 | Not Available | Positive | 853648 - 854868 | 43381.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





