Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase, nudix family protein | SAMEA3710568_00770 | Not Available | Positive | 717666 - 718208 | 20304.9 |
| s-transferase | SAMEA3710568_00771 | Not Available | Negative | 718241 - 719719 | 53183.1 |
| phosphate acetyltransferase | SAMEA3710568_00772 | Not Available | Negative | 719951 - 722095 | 77176.6 |
| acetate kinase | SAMEA3710568_00773 | Not Available | Negative | 722170 - 723372 | 43264.9 |
| membrane protein yfbv | SAMEA3710568_00774 | Not Available | Positive | 723710 - 724165 | 17199.2 |
| protein yfbu | SAMEA3710568_00775 | Not Available | Positive | 724248 - 724742 | 19549.4 |
| putative phosphatase | SAMEA3710568_00776 | Not Available | Positive | 724753 - 725403 | 22998.8 |
| trap transporter, dctm-like membrane protein | SAMEA3710568_00777 | Not Available | Positive | 725490 - 727322 | 65892.9 |
| 5'-nucleotidase yfbr | SAMEA3710568_00778 | Not Available | Negative | 727381 - 727980 | 22711.3 |
| aminotransferase alat | SAMEA3710568_00779 | Not Available | Negative | 728064 - 729281 | 45519.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





