Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial usher family protein | SAMEA3710568_00730 | Not Available | Positive | 681770 - 682525 | 28266.5 |
| fimbrial usher family protein | SAMEA3710568_00731 | Not Available | Positive | 682618 - 683628 | 37499.7 |
| fimbrial usher family protein | SAMEA3710568_00732 | Not Available | Positive | 683625 - 684410 | 27598.2 |
| chaperone | SAMEA3710568_00733 | Not Available | Positive | 684430 - 684897 | 17223.9 |
| putative minor fimbrial subunit | SAMEA3710568_00734 | Not Available | Positive | 685199 - 685705 | 17731.4 |
| putative minor fimbrial subunit | SAMEA3710568_00735 | Not Available | Positive | 685702 - 686172 | 17035.3 |
| fimbrial-like protein | SAMEA3710568_00736 | Not Available | Positive | 686169 - 686693 | 18259.6 |
| protein of uncharacterised function (duf2544) | SAMEA3710568_00737 | Not Available | Positive | 686785 - 687570 | 28507.4 |
| putative smr domain protein | SAMEA3710568_00738 | Not Available | Negative | 687674 - 688225 | 21014.5 |
| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase | SAMEA3710568_00739 | Not Available | Positive | 688391 - 689323 | 34999.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





