Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Acyltransferase | SAMEA3710568_04207 | Not Available | Positive | 4098769 - 4099818 | 40065.0 |
| Tail protein | SAMEA3710568_04209 | Not Available | Negative | 4100997 - 4101647 | 22638.8 |
| Head-tail joining protein | SAMEA3710568_04210 | Not Available | Negative | 4102380 - 4102757 | 13636.0 |
| Dna packaging protein | SAMEA3710568_04211 | Not Available | Negative | 4102769 - 4103155 | 13309.5 |
| Bacteriophage major capsid protein | SAMEA3710568_04212 | Not Available | Negative | 4103207 - 4104235 | 38275.6 |
| Bacteriophage head decoration protein | SAMEA3710568_04213 | Not Available | Negative | 4104293 - 4104640 | 12158.5 |
| Bacteriophage prohead protease | SAMEA3710568_04214 | Not Available | Negative | 4104677 - 4106182 | 52568.3 |
| Bacteriophage portal protein | SAMEA3710568_04215 | Not Available | Negative | 4106172 - 4106585 | 15994.0 |
| Bacteriophage portal protein | SAMEA3710568_04216 | Not Available | Negative | 4106710 - 4107765 | 39189.6 |
| Bacteriophage head-to-tail joining protein | SAMEA3710568_04217 | Not Available | Negative | 4107762 - 4107965 | 7517.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





