Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase ii | SAMEA3710568_00624 | Not Available | Negative | 579973 - 580563 | 21837.3 |
| phosphatidylglycerophosphatase b | SAMEA3710568_00625 | Not Available | Positive | 580733 - 581497 | 29022.8 |
| inner membrane protein ycis | SAMEA3710568_00626 | Not Available | Positive | 581646 - 581954 | 11352.1 |
| tetratricopeptide repeat protein | SAMEA3710568_00627 | Not Available | Positive | 581961 - 583130 | 44464.4 |
| orotidine 5'-phosphate decarboxylase | SAMEA3710568_00628 | Not Available | Positive | 583263 - 584060 | 28489.3 |
| translation initiation factor sui1 | SAMEA3710568_00629 | Not Available | Positive | 584060 - 584386 | 11382.9 |
| lipoprotein | SAMEA3710568_00630 | Not Available | Negative | 584512 - 584730 | 6948.51 |
| deor family transcriptional regulator | SAMEA3710568_00631 | Not Available | Negative | 584999 - 585748 | 27590.2 |
| protein yciz | SAMEA3710568_00632 | Not Available | Negative | 585838 - 586011 | 6471.74 |
| rnase ii stability modulator | SAMEA3710568_00633 | Not Available | Negative | 586159 - 586839 | 25541.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





