Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endopeptidase | SAMEA3710568_04863 | Not Available | Negative | 4657427 - 4657675 | 9050.85 |
| tail fiber assembly protein | SAMEA3710568_04864 | Not Available | Negative | 4658243 - 4658422 | 6434.64 |
| phage tail fiber protein | SAMEA3710568_04865 | Not Available | Negative | 4658422 - 4658787 | 13927.4 |
| shikimate transporter | SAMEA3710568_04866 | Not Available | Negative | 4659033 - 4659506 | 17753.2 |
| transposase | SAMEA3710568_04867 | Not Available | Negative | 4659972 - 4660418 | 17384.1 |
| lysozyme protein r of prophage cp-933k | SAMEA3710568_04868 | Not Available | Negative | 4661929 - 4662357 | 15197.3 |
| is100 orf2 | SAMEA3710568_04869 | Not Available | Negative | 4662767 - 4663000 | 8860.67 |
| is600 orf1 | SAMEA3710568_04870 | Not Available | Positive | 4665040 - 4665261 | 8018.61 |
| uncharacterised protein | SAMEA3710568_04871 | Not Available | Positive | 4665601 - 4665906 | 12207.8 |
| transposase family | SAMEA3710568_04872 | Not Available | Positive | 4667067 - 4667354 | 10699.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





